3. Quick start for the locally running version
The following shows the demo code of PredCID.
Please feel free to contact us if you need any help: firstname.lastname@example.org
getResults("example","outputFileName")#example.csv is a file containing frameshift indels.
In general, the predictions are done on the fly, and in seconds to minutes, depending mainly on the size of the input data. Users will receive an email attached with the result file. For each input, the model returns a score between zero and one, where indels with higher scores are more likely to be driver frameshift indel. Here, the indels with scores greater than 0.5 are predicted as drivers.